Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs6589592 | chr11:116957907 | C/G | 0.000316 | 210 | 11.43 | 15.28 | 16.43 | KM Plot |
| KIRP | rs66516462 | chr16:20452612 | G/A | 0.000386 | 212 | 16.43 | 13.6 | 5.88 | KM Plot |
| KIRP | rs66569924 | chr1:89550790 | C/T | 7.64E-5 | 209 | 15.65 | 19.53 | 9.38 | KM Plot |
| KIRP | rs6666213 | chr1:95274365 | A/G | 3.16E-6 | 208 | 16.47 | 15.88 | 11.43 | KM Plot |
| KIRP | rs66670048 | chr11:999764 | T/C | 4.02E-8 | 210 | 14.87 | 19.3 | 10.6 | KM Plot |
| KIRP | rs66710351 | chr10:70712050 | T/C | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs66737526 | chr8:30025096 | T/C | 1.97E-6 | 207 | 15.33 | 14.85 | 0.2 | KM Plot |
| KIRP | rs6675132 | chr1:95298849 | G/T | 4.09E-6 | 208 | 16.47 | 16.93 | 12.3 | KM Plot |
| KIRP | rs6676991 | chr1:95286658 | C/A | 0.000105 | 204 | 13.17 | 17 | 16.45 | KM Plot |
| KIRP | rs66785117 | chr6:27523298 | T/G | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs6678777 | chr1:89589147 | T/C | 9.32E-5 | 211 | 10 | 19.47 | 14.53 | KM Plot |
| KIRP | rs6678909 | chr1:95259174 | G/A | 8.3E-5 | 211 | 16.5 | 15.88 | 11.43 | KM Plot |
| KIRP | rs6680013 | chr1:180089456 | A/G | 1.19E-5 | 214 | 10.6 | 15.4 | 16.43 | KM Plot |
| KIRP | rs66813209 | chr3:190148785 | T/C | 5.82E-5 | 210 | 13.8 | 19.92 | 12.1 | KM Plot |
| KIRP | rs66823108 | chr6:26377939 | G/A | 3.8E-7 | 212 | 16.43 | 13.38 | 9.77 | KM Plot |